Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392473: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-286562' containing sample 'Staphylococcus aureus M0339'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6M spots, 1.2G bases, 554Mb downloads

UUID: b36d571c-bbd2-40d4-a932-d2fd6772b029

Design: Illumina sequencing of Staphylococcus aureus M0339 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216395 • SRP031137 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0339

SAMN02325349 • SRS490708 • All experiments • All runs

Organism: Staphylococcus aureus M0339

Library:

Name: Pond-286562

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 417993.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YLZN

material_type: DNA:DNA Somatic

product_order: PDO-1798

product_part_number: P-WG-0004

project: G44770

research_project: RP-433

root_sample_id: SM-4CUME

sample_id: SM-4YLZN

work_request: 38773

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-13 00:20:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6M spots, 1.2G bases, 554Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050579	3,020,382	610.1M	276.2Mb	2013-12-16
SRR1050580	3,024,398	610.9M	277.8Mb	2013-12-16

ID:: 563328

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